search

greenelab / ADAGEpath

An R package (ADAGEpath) to perform signature analysis using methodology from the ADAGE manuscript
BSD 3-Clause "New" or "Revised" License
6 stars 6 forks source link

impute dependency and gfortran error #25

Open georgiadoing opened 4 years ago

georgiadoing commented 4 years ago

Following the currently suggested work-around for the error that is thrown upon attempting to install the impute package due to no detectable gfortran did not lead me to resolution.

However, I could install ADAGEpath if I individually installed the impute package beforehand

install.packages("impute")

and then, when installing ADAGEpath (using either devtools or bioc) I dot not update the impute package when prompted.

I'm not sure how universal this work-around is but maybe ADAGEpath installation instructions could suggest it as a troubleshooting option?

cgreene commented 4 years ago

@georgiadoing : can you edit the readme with your proposed instructions and file it as a pull request?