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greenelab
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GCB535
Materials for GCB535 at Penn.
BSD 3-Clause "New" or "Revised" License
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Teach symlinking in unix
#182
cgreene
closed
5 years ago
1
ENCODE I - Data Files Folder
#181
gwaybio
opened
6 years ago
2
ENCODE-II: says mm9, but files available are mm10
#180
bvoight
closed
5 years ago
2
sort command with large bed file (ENCODE-I)
#179
bvoight
opened
6 years ago
1
Phylogenetics reword
#178
kelsj
closed
5 years ago
2
pairwise matrix in phylogenetics w/ twist sequences
#177
cgreene
closed
5 years ago
0
Chip-Seq I: bedtools genomecov killed
#176
bvoight
opened
6 years ago
2
motif 1 Q7 re-word
#175
kelsj
closed
5 years ago
1
ENCODE file downloads
#174
bvoight
closed
5 years ago
1
Alignment Typos
#173
gwaybio
closed
5 years ago
1
Motif III: Clarify what is "an unnecessary file" for the homework
#172
bvoight
closed
5 years ago
1
Motif III: download .html docs
#171
bvoight
closed
5 years ago
1
Motif 3 Typos
#170
gwaybio
closed
5 years ago
0
Check JASPAR `Matrix Align` is working
#169
gwaybio
opened
6 years ago
2
motif-II fixes
#168
kelsj
closed
6 years ago
0
UNIX-I homework
#167
cgreene
closed
5 years ago
1
Fix Kernel assignment for UNIX-I
#166
bvoight
closed
6 years ago
1
Remake Databases assignment
#165
bvoight
opened
6 years ago
0
00_cocalc plagiarism link broken
#164
kelsj
closed
5 years ago
0
update Gene Exp 3 answer key
#163
kelsj
closed
5 years ago
1
Update Intro Slides
#162
cgreene
closed
5 years ago
2
Student's Computational Environment
#161
gwaybio
opened
6 years ago
8
Merge Plagiarism and Co-calc modules
#160
bvoight
closed
6 years ago
0
set time and location for gregs office hours
#159
gwaybio
closed
6 years ago
0
Complete overhaul of RNA-Seq series
#158
bvoight
closed
6 years ago
1
Check dates on course calendar re: good friday
#157
bvoight
closed
6 years ago
1
Redo intro slide
#156
cgreene
closed
5 years ago
2
Add Compute Environment Packages Here
#155
gwaybio
opened
6 years ago
18
syllabus
#154
cgreene
closed
5 years ago
5
Ophir add location to office hours
#153
cgreene
closed
6 years ago
1
Kelsey add location to office hours
#152
cgreene
closed
6 years ago
0
Greg add location -> Office Hours
#151
cgreene
closed
6 years ago
0
Specify not to use ./ when running plink
#150
gwaybio
closed
7 years ago
0
move --noweb plink command after --out
#149
gwaybio
closed
7 years ago
0
Change documentation from SageMathCloud to CoCalc
#148
gwaybio
closed
7 years ago
0
Create Python Kernel called `Python 2 (CoCalc)`
#147
gwaybio
opened
7 years ago
1
Create R Kernel called `R (CoCalc)`
#146
gwaybio
opened
7 years ago
1
Order rubber ducks
#145
cgreene
closed
6 years ago
1
Pay for SMC
#144
cgreene
closed
6 years ago
2
SageMathCloud -> CoCalc
#143
cgreene
closed
7 years ago
0
update syllabus
#142
cgreene
closed
6 years ago
3
Terminal - Jupyter
#141
cgreene
opened
7 years ago
6
Typo Correction
#140
gwaybio
closed
7 years ago
1
Include link to Sarah's original python materials
#139
ksiewert
closed
6 years ago
1
every time there's a p-value, ask interpretation question
#138
cgreene
closed
6 years ago
1
present sample sizes in prelim proposal; perhaps a section on 'feasibility'
#137
bvoight
closed
6 years ago
1
Variation-II
#136
kelsj
closed
6 years ago
3
Plink: don't use ./
#135
bvoight
closed
7 years ago
0
Plink: mds incln mds file
#134
bvoight
closed
6 years ago
1
Plink: --noweb at front
#133
bvoight
closed
7 years ago
0
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