greenelab / computational-reagents

Rigor, Reproducibility, Transparency, and Reagent Validity for Computational Biologists
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CoGe (genomevolution.org) #18

Open sklasfeld opened 7 years ago

sklasfeld commented 7 years ago

This is a website for genome visualization (and phylogenetic analysis). It contains a JBrowse to visualize genomic and epigenomic features. Users can import their own genomes and other data files as well as share them. However, there are still a lot of bugs to work out. For example, there may be redundant data which could cause confusion. Scientists could map their data to one genome version on CoGe and others could map their data to another version on Coge. However, they may actually be the same genome uploaded from different users. There is also no requirements for information one must post about the data they are uploading. Therefore, people could upload data that may not be reproducible.