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greenelab
/
connectivity-search-backend
Django backend for hetnet connectivity search
https://search-api.het.io
BSD 3-Clause "New" or "Revised" License
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https://search-api.het.io/ is currently down or inaccessible
#83
dhimmel
closed
3 years ago
2
Put two Django settings in secrets.yml
#82
dongbohu
closed
3 years ago
1
Use a clean git repo in the production search-api.het.io instance
#81
dhimmel
closed
3 years ago
5
Update deployment steps
#80
dongbohu
closed
3 years ago
1
Populate database: keep Compound Disease path counts
#79
dhimmel
closed
3 years ago
5
Migrate hosting to GCP from AWS
#78
dhimmel
closed
3 years ago
4
Zenodo urllib.request.urlretrieve downloads raise ContentTooShortError
#77
dhimmel
closed
3 years ago
4
search-api.het.io SSH access and main branch rename
#76
dhimmel
closed
3 years ago
2
Improvements to the database accessibility
#75
dhimmel
closed
3 years ago
8
dj_hetmech_app_node does not include in the code
#74
siyuniu
closed
3 years ago
12
populate_database.py: "data" should be "properties"
#73
LuciaWL001
closed
4 years ago
4
Minimal rename to connectivity-search-backend
#72
dhimmel
closed
4 years ago
1
Rename repository to connectivity-search-backend
#71
dhimmel
closed
4 years ago
1
Major environment update: Python 3.8, Django 3
#70
dhimmel
closed
4 years ago
3
Update readme with runserver instructions
#69
dhimmel
closed
4 years ago
0
Refactor API endpoints for consistency
#68
dhimmel
closed
4 years ago
1
Refactor endpoint names/urls
#67
vincerubinetti
closed
4 years ago
7
counts-metapaths-to endpoint: support metanodes filter
#66
dhimmel
closed
5 years ago
1
query-paths: compute path_count for on-the-fly rows
#65
dhimmel
closed
5 years ago
0
Return path count for non-precomputed rows
#64
dhimmel
closed
5 years ago
0
DegreeGroupedPermutation table contains NaN values
#63
dhimmel
opened
5 years ago
2
Enable complete list of metapaths for get-metapaths query
#62
dhimmel
closed
5 years ago
0
Package renamed: hetio is now hetnetpy
#61
dhimmel
closed
5 years ago
1
Postgres Database Optimization
#60
dongbohu
closed
5 years ago
10
Add fuzzy search
#59
dongbohu
closed
5 years ago
6
Add metatype filter to all applicable queries
#58
vincerubinetti
closed
5 years ago
3
Change `max-paths` to `limit`, and add `limit` for all queries that return lists
#57
vincerubinetti
closed
4 years ago
0
Improve performance/lag for benefit of frontend
#56
vincerubinetti
opened
5 years ago
0
query-paths: compute DWPC p-value on-the-fly
#55
dhimmel
closed
5 years ago
3
deployment: git pull fast-forward only
#54
dhimmel
closed
5 years ago
1
count-metapaths-to not returning metapath_count
#53
dhimmel
closed
5 years ago
5
Implement elastic search or similar
#52
vincerubinetti
closed
5 years ago
11
nodes endpoint: search against a node and report n_metapaths
#51
dhimmel
closed
5 years ago
7
Cleanup & document code (mostly around API views)
#50
dhimmel
closed
5 years ago
1
Improve ordering of matches for nodes endpoint
#49
dhimmel
closed
5 years ago
4
random-node-pair endpoint for nodes with metapaths
#48
dhimmel
closed
5 years ago
2
query-metapaths: return PDP queries
#47
dhimmel
closed
5 years ago
1
nodes and query-paths endpoints return node data in different formats
#46
dhimmel
opened
5 years ago
3
Update environment on 2019-05-02
#45
dhimmel
closed
5 years ago
4
Log warning but don't fail when multiple pathcounts returned
#44
dhimmel
closed
5 years ago
1
query-paths fails due to duplicate rows for symmetric metapaths
#43
dhimmel
closed
5 years ago
4
Enable inverted path score lookup in get_paths
#42
dhimmel
closed
5 years ago
0
increase amount of database to populate
#41
dhimmel
closed
5 years ago
4
Switch to using neo4j to load Nodes table
#40
dhimmel
closed
5 years ago
3
query_paths endpoint: incorporate metapath scores
#39
dhimmel
closed
5 years ago
1
get_paths endpoint: add hetio-derived info
#38
dhimmel
closed
5 years ago
1
Add error handling in "query-paths" API
#37
dongbohu
closed
5 years ago
0
Harmonize database node ids between postgres and neo4j
#36
dhimmel
closed
5 years ago
1
Continuous deployment fails to update conda environment
#35
dhimmel
closed
5 years ago
4
Add "query-path" API Endpoint
#34
dongbohu
closed
5 years ago
1
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