greenelab / connectivity-search-backend

Django backend for hetnet connectivity search
https://search-api.het.io
BSD 3-Clause "New" or "Revised" License
6 stars 2 forks source link

Specify conda environment #5

Closed dhimmel closed 5 years ago

dhimmel commented 5 years ago

Installation failed on my machine:

Downloading data/hetionet-v1.0.hetmat/permutations/004.hetmat/edges/AeG.sparse.npz (297 KB)
Downloading data/hetionet-v1.0.hetmat/permutations/004.hetmat/edges/AuG.sparse.npz (103 KB)
Error downloading object: data/hetionet-v1.0.hetmat/permutations/004.hetmat/edges/AuG.sparse.npz (5c275a5): Smudge error: Error downloading data/hetionet-v1.0.hetmat/permutations/004.hetmat/edges/AuG.sparse.npz (5c275a5e08711a7331623bf38f7f052c46e8fcd05d1b49c3143252bbfd9f07bd): batch response: Rate limit exceeded: https://github.com/greenelab/hetmech.git/info/lfs/objects/batch

Errors logged to /tmp/pip-req-build-zm3e9v4q/.git/lfs/objects/logs/20181101T161459.610673657.log
Use `git lfs logs last` to view the log.
error: external filter 'git-lfs filter-process' failed
fatal: data/hetionet-v1.0.hetmat/permutations/004.hetmat/edges/AuG.sparse.npz: smudge filter lfs failed
warning: Clone succeeded, but checkout failed.
You can inspect what was checked out with 'git status'
and retry the checkout with 'git checkout -f HEAD'

@zietzm We are now paying the price for combining the library with the data analyses into a single repo.