greenelab connectivity-search-backend issues

greenelab / connectivity-search-backend

Django backend for hetnet connectivity search

https://search-api.het.io

BSD 3-Clause "New" or "Revised" License

6 stars 2 forks source link

issues

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https://search-api.het.io/ is currently down or inaccessible

#83 dhimmel closed 3 years ago
2
Put two Django settings in secrets.yml

#82 dongbohu closed 3 years ago
1
Use a clean git repo in the production search-api.het.io instance

#81 dhimmel closed 3 years ago
5
Update deployment steps

#80 dongbohu closed 3 years ago
1
Populate database: keep Compound Disease path counts

#79 dhimmel closed 3 years ago
5
Migrate hosting to GCP from AWS

#78 dhimmel closed 3 years ago
4
Zenodo urllib.request.urlretrieve downloads raise ContentTooShortError

#77 dhimmel closed 3 years ago
4
search-api.het.io SSH access and main branch rename

#76 dhimmel closed 3 years ago
2
Improvements to the database accessibility

#75 dhimmel closed 3 years ago
8
dj_hetmech_app_node does not include in the code

#74 siyuniu closed 3 years ago
12
populate_database.py: "data" should be "properties"

#73 LuciaWL001 closed 4 years ago
4
Minimal rename to connectivity-search-backend

#72 dhimmel closed 4 years ago
1
Rename repository to connectivity-search-backend

#71 dhimmel closed 4 years ago
1
Major environment update: Python 3.8, Django 3

#70 dhimmel closed 4 years ago
3
Update readme with runserver instructions

#69 dhimmel closed 4 years ago
0
Refactor API endpoints for consistency

#68 dhimmel closed 4 years ago
1
Refactor endpoint names/urls

#67 vincerubinetti closed 4 years ago
7
counts-metapaths-to endpoint: support metanodes filter

#66 dhimmel closed 5 years ago
1
query-paths: compute path_count for on-the-fly rows

#65 dhimmel closed 5 years ago
0
Return path count for non-precomputed rows

#64 dhimmel closed 5 years ago
0
DegreeGroupedPermutation table contains NaN values

#63 dhimmel opened 5 years ago
2
Enable complete list of metapaths for get-metapaths query

#62 dhimmel closed 5 years ago
0
Package renamed: hetio is now hetnetpy

#61 dhimmel closed 5 years ago
1
Postgres Database Optimization

#60 dongbohu closed 5 years ago
10
Add fuzzy search

#59 dongbohu closed 5 years ago
6
Add metatype filter to all applicable queries

#58 vincerubinetti closed 5 years ago
3
Change `max-paths` to `limit`, and add `limit` for all queries that return lists

#57 vincerubinetti closed 4 years ago
0
Improve performance/lag for benefit of frontend

#56 vincerubinetti opened 5 years ago
0
query-paths: compute DWPC p-value on-the-fly

#55 dhimmel closed 5 years ago
3
deployment: git pull fast-forward only

#54 dhimmel closed 5 years ago
1
count-metapaths-to not returning metapath_count

#53 dhimmel closed 5 years ago
5
Implement elastic search or similar

#52 vincerubinetti closed 5 years ago
11
nodes endpoint: search against a node and report n_metapaths

#51 dhimmel closed 5 years ago
7
Cleanup & document code (mostly around API views)

#50 dhimmel closed 5 years ago
1
Improve ordering of matches for nodes endpoint

#49 dhimmel closed 5 years ago
4
random-node-pair endpoint for nodes with metapaths

#48 dhimmel closed 5 years ago
2
query-metapaths: return PDP queries

#47 dhimmel closed 5 years ago
1
nodes and query-paths endpoints return node data in different formats

#46 dhimmel opened 5 years ago
3
Update environment on 2019-05-02

#45 dhimmel closed 5 years ago
4
Log warning but don't fail when multiple pathcounts returned

#44 dhimmel closed 5 years ago
1
query-paths fails due to duplicate rows for symmetric metapaths

#43 dhimmel closed 5 years ago
4
Enable inverted path score lookup in get_paths

#42 dhimmel closed 5 years ago
0
increase amount of database to populate

#41 dhimmel closed 5 years ago
4
Switch to using neo4j to load Nodes table

#40 dhimmel closed 5 years ago
3
query_paths endpoint: incorporate metapath scores

#39 dhimmel closed 5 years ago
1
get_paths endpoint: add hetio-derived info

#38 dhimmel closed 5 years ago
1
Add error handling in "query-paths" API

#37 dongbohu closed 5 years ago
0
Harmonize database node ids between postgres and neo4j

#36 dhimmel closed 5 years ago
1
Continuous deployment fails to update conda environment

#35 dhimmel closed 5 years ago
4
Add "query-path" API Endpoint

#34 dongbohu closed 5 years ago
1