greenelab / mpmp

Multimodal Pan-cancer Mutation Prediction
BSD 3-Clause "New" or "Revised" License
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Figure edits #56

Closed jjc2718 closed 3 years ago

jjc2718 commented 3 years ago

Closes #50.

This PR makes some small changes to the figures and how they're generated, both from a previous PR (see linked issue) and from some collaborator feedback (see greenelab/mpmp-manuscript#24).

The major changes to the code are:

Additional changes are mostly small tweaks to color schemes, etc.

jjc2718 commented 3 years ago

I refactored the plot script 05_classify_mutations_multimodal/plot_multimodal_results.ipynb to plot the results with both the compressed features (main paper) and raw features (supplementary figures), so they should both happen anytime the script runs. Let me know if this seems cleaner.