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netscape
Exploring the network/pathway regularization landscape for gene expression data
BSD 3-Clause "New" or "Revised" License
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Make naming scheme in network regularization script more general
#21
jjc2718
opened
4 years ago
0
Network edge permutation experiments
#20
jjc2718
closed
4 years ago
0
Compare stability of PyTorch vs. sklearn optimizers
#19
jjc2718
opened
4 years ago
0
Convert learning curve functionality to use TensorBoard
#18
jjc2718
opened
4 years ago
1
Network regularization implementation + simulations
#17
jjc2718
closed
4 years ago
0
Rename repository
#16
jjc2718
closed
4 years ago
0
Clean up code duplication/redundancy
#15
jjc2718
closed
4 years ago
0
Logistic regression (log-linear data) simulation experiments
#14
jjc2718
closed
4 years ago
0
Use deterministic mode when running PyTorch models on GPU
#13
jjc2718
closed
4 years ago
1
PyTorch L1 regularization experiments
#12
jjc2718
closed
4 years ago
0
PyTorch logistic regression - implementation and comparison against scikit-learn
#11
jjc2718
closed
4 years ago
0
Add classifier coefficient sparsity plot to downstream analysis script
#10
jjc2718
closed
5 years ago
0
Unit tests for PLIER data model and symbol mapping script
#9
jjc2718
closed
5 years ago
0
Refactor data_models to generalize across methods/algorithms
#8
jjc2718
closed
4 years ago
2
Explore per-algorithm data transformation
#7
jjc2718
opened
5 years ago
0
Add analysis of weight matrix similarity/sparsity
#6
jjc2718
closed
5 years ago
0
Think of a better/less generic project name
#5
jjc2718
closed
4 years ago
0
Experiments with varying PLIER pathways dataset
#4
jjc2718
closed
5 years ago
0
Integrating PLIER algorithm into mutation detection pipeline
#3
jjc2718
closed
5 years ago
1
Set up mutation prediction pipeline, round 2
#2
jjc2718
closed
5 years ago
0
Set up mutation prediction pipeline + reproduce BioBombe results
#1
jjc2718
closed
5 years ago
5