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greenelab / pdx_exomeseq

Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models
MIT License
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Add OncoPrint, Similarity, and UpSetR visualizations BEFORE COSMIC filtration #47

Closed gwaybio closed 6 years ago

gwaybio commented 6 years ago

This will provide a more complex view of similarity across passages - how many variants are technical errors?

gwaybio commented 6 years ago

Decided that this was only feasible to visualize in the similarity and UpSetR visualizations. Oncoprint would be severely washed out

See #56 (UpSetR) and #59 (OncoPrint)