Rerun Oncoprint Data Generation with New Sample IDs

greenelab / pdx_exomeseq

Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models

MIT License

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Closed gwaybio closed 6 years ago

gwaybio commented 6 years ago

Rerunning the oncoprint results generation with new sample IDs.

Also adding prefiltered variants binary matrix generation for all amino acid changing mutations.

Refs #47

gwaybio commented 6 years ago

new additions move an R script to a notebook with an R kernel.

Also closes #43 and with this addition, closes #47