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greenelab / tybalt

Training and evaluating a variational autoencoder for pan-cancer gene expression data
BSD 3-Clause "New" or "Revised" License
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Add Simulation Data #107

Closed gwaybio closed 6 years ago

gwaybio commented 6 years ago

The pull request performs two operations:

  1. Adds notebook to generate and visualize simulation data scripts/simulation_experiment_data.ipynb
  2. Upgrades simulated data function to output tibble data frames.

The rationale for each simulated feature and proposed evaluation strategy is presented in the notebook. This is related to #104