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greenelab / tybalt

Training and evaluating a variational autoencoder for pan-cancer gene expression data
BSD 3-Clause "New" or "Revised" License
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t-SNT visualization #151

Closed RunenrCode closed 4 years ago

RunenrCode commented 5 years ago

hi, Which part of the code is to achieve T-SNE visualization of all tumor VAE coding features? I didn't find it in the project.

gwaybio commented 5 years ago

https://github.com/greenelab/tybalt/blob/master/tsne_tybalt_features.ipynb

https://github.com/greenelab/tybalt/blob/master/scripts/viz/tsne_viz.R

stale[bot] commented 4 years ago

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