This PR adds a pathway analysis script that performs overrepresentation pathway analyses for the hgsc and skcm associated nodes' high weight genes extracted from #67.
There are two parts to this PR:
The pathway analysis script (commit 0f90680)
The autogenerated results of the pathway analysis for hgsc (commit ee33df2) and skcm (commit b44c56e)
Probably only worth reviewing the pathway analysis script for content.
Thanks @jaclyn-taroni and @danich1 - I believe the most recent commit f35e9b8 and my specific in-line responses address your comments. Ready again for review!
This PR adds a pathway analysis script that performs overrepresentation pathway analyses for the hgsc and skcm associated nodes' high weight genes extracted from #67.
There are two parts to this PR:
Probably only worth reviewing the pathway analysis script for content.