gregversteeg / bio_corex

A flexible version of CorEx developed for bio-data challenges that handles missing data, continuous/discrete variables, multi-CPU, overlapping structure, and includes visualizations
Apache License 2.0
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Finding the optimal number of hidden factors #33

Open YukiSakai1209 opened 1 month ago

YukiSakai1209 commented 1 month ago

Thank you for developing such a helpful tool. I want to optimize the number of hidden factors. In LinearCorex, the linear version of bio_corex, there is a method for optimizing it ( https://github.com/gregversteeg/LinearCorex/issues/4 ), but is there any way to optimize it when using bio_corex? I checked the published usage examples, but the hidden factor number seemed arbitrary, so I would like to know how to optimize it.