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greninger-lab
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rad_assembler
Nextflow pipeline for Reference Assisted De novo assembling whole genome shotgun sequenced viruses.
MIT License
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careful and unicycler assembly error
#16
aslangabriel99
opened
4 months ago
5
Use biopython.convert to generate gff from gb file.
#15
jfurlong
closed
10 months ago
0
Added errorStrategy ignore to SPADES in modules.config
#14
jfurlong
closed
10 months ago
0
Added ivar variants and formatting
#13
jfurlong
closed
10 months ago
0
Merge pull request #10 from greninger-lab/regions
#12
jfurlong
closed
11 months ago
0
Added line to make_reference.R to avoid NA padding.
#11
jfurlong
closed
11 months ago
0
Regions
#10
jfurlong
closed
11 months ago
0
Merge pull request #8 from greninger-lab/regions
#9
jfurlong
closed
11 months ago
0
Regions
#8
jfurlong
closed
11 months ago
0
Merge pull request #6 from greninger-lab/regions
#7
jfurlong
closed
11 months ago
0
Regions
#6
jfurlong
closed
11 months ago
0
Merge from main.
#5
jfurlong
closed
11 months ago
0
Made --bowtie2_host_index optional.
#4
jfurlong
closed
11 months ago
0
Regions
#3
jfurlong
closed
11 months ago
0
bams
#2
proychou
opened
1 year ago
0
samplesheet
#1
proychou
opened
1 year ago
0