remove transposition of transition matrix in iterate_matrix and tests

[jdyen]

Following discussion in #5, set up to avoid matrix transposition in matrix multiplications. This is in line with standard usage in biology (n_{t+1} = A n_t).

Have not updated docs to reflect this. One option is to add an eqn to the @description of iterate_matrix, e.g.,

Calculate the intrinsic growth rate(s) and stable stage distribution(s) for a stage-structured dynamical system, encoded as \code{state_t = matrix %*% state_tm1}.

Alternatively, could add this information to @param matrix or in @details.

[codecov[bot]]

Codecov Report

Merging #14 into master will not change coverage. The diff coverage is 100%.

@@           Coverage Diff           @@
##           master      #14   +/-   ##
=======================================
  Coverage   92.44%   92.44%           
=======================================
  Files           3        3           
  Lines         225      225           
=======================================
  Hits          208      208           
  Misses         17       17

Impacted Files	Coverage Δ
R/iterate_matrix.R	94.21% <100%> (ø)	:arrow_up:

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[goldingn]

Yes, I think the suggested edit to description is best

[jdyen]

Have added that change to the descrition,

[jdyen]

And now wiht recreated Rd files and correct %*% formatting.

[goldingn]

Awesome, thanks. Let me know when you're ready for a review

[jdyen]

Good for review now.

[goldingn]

Yep, this looks great. Thanks!

Could you please bump the dev version number and the date up and I'll merge it.

[goldingn]

Awesome, thank you!