Closed windforclouds closed 3 years ago
I used the sample data
Thanks for the report @windforclouds
It looks like this is mostly due to changes in ensembl/biomart
https://support.bioconductor.org/p/134524/
also had to make a couple minor changes in my code
To fix you'll need to install the development version of biomaRt and the devel version of genvisr either from this repo or the bioconductor devel site.
BiocManager::install('grimbough/biomaRt') devtools:install_github('griffithlab/GenVisR')
should work, make sure you restart R after this. I tested and it works on my end with the example data. I'll wait for your confirmation to close this issue
Thanks, my problem is solved