griffithlab / civic-client

Web client for CIViC: Clinical Interpretations of Variants in Cancer
MIT License
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Add field to track number of individuals associated with an evidence item #907

Open kkrysiak opened 6 years ago

susannasiebert commented 6 years ago

@kkrysiak can you please provide more details for this issue?

kkrysiak commented 6 years ago

We need to discuss this as a group since this is a complex thing.

kkrysiak commented 6 years ago

One suggestion would be the number of individuals with a variant. This would translate well for clinical and case study levels for both germline and somatic contexts.

kkrysiak commented 6 years ago

Interesting use cases.

malachig commented 4 years ago

This field, could be called study size

malachig commented 4 years ago

It was also proposed that we could have a list of counts (study size, number of families, treatment arm size, etc.) and each fo these could have a count assigned.

arpaddanos commented 4 years ago

This issue is relevant for questions of associating HPO phenotypes to occurrences of the mutation, in a family, or down to the individual patient. It also might associate occurrences of the mutation with a VHL phenotype in general with no phenotype at all.

arpaddanos commented 4 years ago

A discussion relevant to this will occur in July 2020 with the VHL group.