Closed malachig closed 2 years ago
I was thinking this could be a task to incorporate structured information about drugs into civic. Right now, we've mapped all of the drug names returned by the civic API to wikidata QIDs. It would be better if civic returned pubchem IDs which we could retrieve QIDs for.
https://github.com/SuLab/scheduled-bots/blob/master/scheduled_bots/civic/drugs.tsv
Another idea is to take advantage of the sitelinks and label translations in Wikidata to "internationalize" civic. i.e. make available translations of diseases, drugs, or gene names.
@stuppie, here's the list that @kkrysiak assembled
New updated list current as of oct 15 2018, with pmids https://github.com/SuLab/scheduled-bots/blob/master/scheduled_bots/civic/drugname_pmid_oct_2018.csv
I've combined the two spreadsheets here: https://docs.google.com/spreadsheets/d/1FL_Mim29q5Osloazj7rbNFoD4sdga247GE__qN1b4yc/edit?usp=sharing
Some interesting drug issues: https://docs.google.com/presentation/d/1C483_2h2cz6A2O4LFvlgGjVXXf1elpNnGW8KQCXuUXM/edit?usp=sharing
Elevator pitch to be lead by Greg Stupp (Su lab) @stuppie