Potential improvements to the pVACview NeoFox module

[susannasiebert]

• [ ] Allow gene of interest tsv upload and highlight these genes like we do in the pVACseq module
• [x] Add heatmap background to the various IC50 columns
• [x] Add barplot background to the VAF & expression columns
• [ ] Add red highlighting to the mutation_not_found_in_proteome column
• [x] Add an evaluation selector column and counters
• [x] Allow for export of the main table with the selected evaluation
• [ ] Come up with some sort of algorithm that would allow us to tier the candidates.
  • [ ] Use sensible defaults; show these in a section
  • [ ] Allow users to re-tier with different thresholds; show current thresholds in a section
  • [ ] Allow users to reset the tiering
  • [ ] Add red outlines to fields that result in lower tiers
• [ ] Add algorithm concordance violin plots for a single variant
• [ ] I think it could be interesting to display the register that each algorithm determined as the “best” epitope in context of the full peptide