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grp-bork / gunc

Python package for detection of chimerism and contamination in prokaryotic genomes.
GNU General Public License v3.0
66 stars 8 forks source link

diamond error #33

Closed nashanghenzan closed 1 year ago

nashanghenzan commented 1 year ago

it seems that my computer don't support diamond 20.0..4, error info: 

terminate called after throwing an instance of 'std::runtime_error'
  what():  CPU does not support SSSE3. Please compile the software from source.
Aborted (core dumped)
fullama commented 1 year ago

How did you install gunc? Was it via conda?

nashanghenzan commented 1 year ago

How did you install gunc? Was it via conda?

yes, it was installed via conda, but even i don't install gunc and ran diamond 20.0.4 independly, it shows the same error.

fullama commented 1 year ago

well you can try compiling diamond yourself https://github.com/bbuchfink/diamond/wiki/2.-Installation conda does not seem to be installing a diamond version that will work with your cpu

nashanghenzan commented 1 year ago

well you can try compiling diamond yourself https://github.com/bbuchfink/diamond/wiki/2.-Installation conda does not seem to be installing a diamond version that will work with your cpu

many thanks, i successfully compiling diamond 20.0.4！