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grunwaldlab / analysis_of_microbiome_community_data_in_r

This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://grunwaldlab.github.io/analysis_of_microbiome_community_data_in_r/
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Find example dataset(s) #2

Closed zachary-foster closed 6 years ago

zachary-foster commented 6 years ago

Should go into appendix with description

zachary-foster commented 6 years ago

This one might be usable, but not ideal:

http://datadryad.org/resource/doi:10.5061/dryad.01f10

zachary-foster commented 6 years ago

This one is much better formatted:

http://datadryad.org/resource/doi:10.5061/dryad.2b2dj

Not about disease, but at least its plants

zachary-foster commented 6 years ago

Best so far:

http://datadryad.org/resource/doi:10.5061/dryad.g60r3

Lots of data. Good publication and authors (nature, dangle, lundberg) About plant genotype -microbiome interactions, but not disease

zachary-foster commented 6 years ago

I think we have decided on the Wagner dataset