grunwaldlab / effectR

An R package to call oomycete effectors
10 stars 7 forks source link

Safe paths #12

Closed zkamvar closed 6 years ago

zkamvar commented 6 years ago

hmm.search() moves into a temporary directory to do the processing steps, but if it is forced to exit before the command completes, the user finds themselves in a new working directory. This PR fixes that. Moreover, I've added path.expand() for the hmm.path and mafft.path to allow users to specify the home directory as ~

Tabima commented 6 years ago

Thanks!