gszep FlowAtlas.jl issues

gszep / FlowAtlas.jl

an interactive explorer for flow cytometry data

MIT License

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issues

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incorrect encoding of + char in urls skips FCS files

#38 gszep closed 2 months ago
2
Open a set of FCS files without a .wsp file?

#37 tlnagy opened 5 months ago
2
Batch correction

#36 gszep opened 10 months ago
1
error right at the beginning

#35 vblanche21 closed 10 months ago
4
update to use JSServe v2

#34 gszep opened 1 year ago
0
labels on colour bar showing fluorescence heatmap are clipped

#33 gszep closed 1 year ago
2
Hiding doms in JSServe v1.2.4 prevents OpenLayers from displaying tiles

#32 gszep closed 2 years ago
8
CompatHelper: bump compat for ImageIO to 0.6, (keep existing compat)

#31 github-actions[bot] closed 2 years ago
0
CompatHelper: bump compat for Images to 0.25, (keep existing compat)

#30 github-actions[bot] closed 2 years ago
1
CompatHelper: bump compat for MetaGraphs to 0.7, (keep existing compat)

#29 github-actions[bot] closed 2 years ago
0
use quadtree to store embedding coordinates

#28 gszep opened 3 years ago
0
display percentage labels alongside gated populations

#27 gszep opened 3 years ago
0
update violin plots when dragging gates

#26 gszep opened 3 years ago
0
TagBot trigger issue

#25 JuliaTagBot closed 3 years ago
15
CompatHelper: bump compat for "ImageIO" to "0.5"

#24 github-actions[bot] closed 3 years ago
1
embedding with missing data

#23 gszep closed 3 years ago
4
batch effect warning

#22 gszep opened 3 years ago
0
warning when user compares results from differing data origins

#21 gszep opened 3 years ago
0
filters do not show cells when no conditions/groups are present

#20 gszep closed 3 years ago
1
restructure runner as julia package

#19 gszep closed 3 years ago
20
use browser cache to store default colour scheme preferences

#18 gszep opened 3 years ago
0
user input for naming polygons; display in violin plot legend

#17 gszep opened 3 years ago
0
only display selected conditions on frequency panel

#16 gszep closed 3 years ago
0
colorby populations, conditions, groups

#15 gszep opened 3 years ago
0
reset button

#14 gszep opened 3 years ago
0
dynamic colorbar and gate by level

#13 gszep closed 3 years ago
6
csv, svg export of panel figures

#12 gszep closed 3 years ago
6
missing group="tLN" for sampleIDs 9 and 34

#11 gszep closed 3 years ago
1
workspace

#10 gszep closed 4 years ago
0
Add Gating-ML files for the rest of FCS files with B-cells

#9 mad3cientist closed 3 years ago
0
Benchmark against FlowCAP-III

#8 mad3cientist opened 4 years ago
0
Explore other clustering algorithm options

#7 mad3cientist opened 4 years ago
0
Optimising cluster hyperparameters

#6 mad3cientist opened 4 years ago
0
Time series of all channels signal anomaly gating

#5 mad3cientist opened 4 years ago
0
Singlet and Live cell extraction

#4 mad3cientist opened 4 years ago
0
add CD19 channel and B-cells back

#3 mad3cientist closed 3 years ago
1
Optional batch normalisation to reference fcs files

#2 mad3cientist opened 4 years ago
0
Confusion matrix and ROC

#1 mad3cientist opened 4 years ago
0