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gt1 / biobambam2

Tools for early stage alignment file processing
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2.0.83 - precompiled archive duplicated content #64

Closed keiranmraine closed 6 years ago

keiranmraine commented 6 years ago

The precompiled tar.gz seems to have the data duplicated within itself:

2.0.79:

$ mkdir biobambam2
$ curl -sSL https://github.com/gt1/biobambam2/releases/download/2.0.79-release-20171006114010/biobambam2-2.0.79-release-20171006114010-x86_64-etch-linux-gnu.tar.gz | tar --strip-components 3 -C biobambam2 -zx
$ ls -l biobambam2/
total 29
drwxr-x--- 2 usr group 12288 Oct  6 10:55 bin
drwxr-x--- 2 usr group  4096 Oct  4 15:19 build
drwxr-x--- 3 usr group  4096 Oct  4 15:21 etc
drwxr-x--- 5 usr group  4096 Oct  6 10:55 lib
-rw-r----- 1 usr group  1663 Oct  6 10:55 README
drwxr-x--- 9 usr group  4096 Oct  4 15:25 share

2.0.83

$ rm -rf biobambam2
$ mkdir biobambam2
$ curl -sSL https://github.com/gt1/biobambam2/releases/download/2.0.83-release-20180105121132/biobambam2-2.0.83-release-20180105121132-x86_64-etch-linux-gnu.tar.gz | tar --strip-components 3 -C biobambam2 -zx
$ ls -l biobambam2/
total 36
drwxr-x--- 2 usr group 12288 Jan  5 11:19 bin
drwxr-x--- 2 usr group  4096 Nov 16 09:44 build
drwxr-x--- 7 usr group  4096 Jan  5 12:23 compile-x86_64-etch-linux-gnu
drwxr-x--- 3 usr group  4096 Nov 16 09:51 etc
drwxr-x--- 5 usr group  4096 Jan  5 11:19 lib
-rw-r----- 1 usr group  1663 Jan  5 11:19 README
drwxr-x--- 9 usr group  4096 Nov 16 09:55 share
gt1 commented 6 years ago

Thank you for notifying me. I have replaced the file.