gtjemwa / augustus

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Producing a clustering model with not in data generates strange error #39

Closed GoogleCodeExporter closed 8 years ago

GoogleCodeExporter commented 8 years ago
I updated my input PMML file to use new fields but forgot to update the config 
file to use the new data file that had those fields.  Running Augustus 
generated this error.

Traceback (most recent call last):
  File "/home/export/dlocke/devel/augustus/augustus-aim/augustus/engine/mainloop.py", line 571, in run
    self.doEnd()
  File "/home/export/dlocke/devel/augustus/augustus-aim/augustus/engine/mainloop.py", line 526, in doEnd
    self.engine.produce()
  File "/home/export/dlocke/devel/augustus/augustus-aim/augustus/engine/engine.py", line 489, in produce
    segment.producerAlgorithm.produce()
  File "/home/export/dlocke/devel/augustus/augustus-aim/augustus/algorithms/clustering.py", line 642, in produce
    convergence.attrib["iterations"] = self.iterations()
  File "/home/export/dlocke/devel/augustus/augustus-aim/augustus/algorithms/clustering.py", line 679, in iterations
    trial.reset()
  File "/home/export/dlocke/devel/augustus/augustus-aim/augustus/algorithms/clustering.py", line 145, in reset
    cluster.reset()
  File "/home/export/dlocke/devel/augustus/augustus-aim/augustus/algorithms/clustering.py", line 192, in reset
    self.initialPosition[i] = u.mean()
  File "/home/export/dlocke/devel/augustus/augustus-aim/augustus/algorithms/eventweighting.py", line 293, in mean
    return self.counters[SUMX] / self.counters[SUM1]
TypeError: unsupported operand type(s) for /: 'instance' and 'float'

Original issue reported on code.google.com by dlo...@opendatagroup.com on 13 Apr 2012 at 4:19

GoogleCodeExporter commented 8 years ago

Original comment by collinbe...@gmail.com on 13 Apr 2012 at 5:50

GoogleCodeExporter commented 8 years ago

Original comment by collinbe...@gmail.com on 13 Apr 2012 at 5:56

GoogleCodeExporter commented 8 years ago
Resolved in trunk as of 709 commit

Original comment by collinbe...@gmail.com on 22 May 2012 at 8:32