guanchangge / mosaik-aligner

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MosaikText (or MosaikSort) double free error #30

Open GoogleCodeExporter opened 8 years ago

GoogleCodeExporter commented 8 years ago
What steps will reproduce the problem?
1. I ran MosaikBuild and MosaikAligner for HG18 without any problems.
2. Then, I ran MosaikText -in filename.dat -eland filename.eland

What is the expected output? What do you see instead?
I get the following output.
--------------------------------------------------------------------------
MosaikText 1.0.1384                                             2010-01-24
Michael Stromberg             Marth Lab, Boston College Biology Department
--------------------------------------------------------------------------

- converting the alignment archive to the following formats: Eland

Converting alignment archive:
100%[===================================]  20,488.9 reads/s       in 02:03
MosaikText(17095,0x7fff7014c700) malloc: *** error for object 0x1001003f0:
double free
*** set a breakpoint in malloc_error_break to debug
MosaikText(17095,0x7fff7014c700) malloc: *** error for object 0x100101fd0:
double free
*** set a breakpoint in malloc_error_break to debug

This keeps on going forever.
It seems like the output text file is okay. 

What version of the product are you using? On what operating system?
64-bit 1.0.1384 Mosaik on Mac Pro (OSX 10.5.8)

Original issue reported on code.google.com by fyz...@gmail.com on 26 Jan 2010 at 3:28