search

guanchangge / mosaik-aligner

Automatically exported from code.google.com/p/mosaik-aligner
0 stars 0 forks source link

feature request for single output file option in MosaikAssembler #32

Open GoogleCodeExporter opened 8 years ago

GoogleCodeExporter commented 8 years ago 
This is a feature request rather than an issue.

We do a lot of transcriptomics work and have to routinely map reads onto
sets of 50,000+ reference sequences. This means that MosaikAssembler
generates 50,000+ gig/ace files. Managing these sorts of numbers of files
is not practical and costs a lot of additional time.

There is currently no option for suppressing this behaviour. Could a simple
switch be added that makes the output go into a single gig/ace file?

Thanks

Original issue reported on code.google.com by micha.ba...@hutton.ac.uk on 28 Jan 2010 at 11:55