Difference between Two Histograms Produced

guigolab / bamstats

A command line tool to compute mapping statistics from a BAM file

BSD 3-Clause "New" or "Revised" License

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Difference between Two Histograms Produced #26

Closed Rohit-Satyam closed 5 years ago

Rohit-Satyam commented 5 years ago

chr1_Coverage_cumulativeHistogram chr1_Coverage_histogram

Hi @emi80

I ran Bamststs to calculate coverage. However, I am confused between Two histograms whose axis are labeled the same. By Coverage depth which histogram represents true Vertical Depth(Coverage). What does different scale for % reference scale signify.

emi80 commented 5 years ago

HI @Rohit-Satyam,

I am sorry I cannot help you. I think you used the tool @ http://bamstats.sourceforge.net/ which is not the program in this GitHub repository.

Best, Emilio

Rohit-Satyam commented 5 years ago

I be my pardon. Confused it with the other one you mentioned.