gzipped gtf errors out when filtering out commented lines

guigolab / ggsashimi

Command-line tool for the visualization of splicing events across multiple samples

MIT License

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gzipped gtf errors out when filtering out commented lines #60

Closed dgarrimar closed 3 years ago

dgarrimar commented 3 years ago

Traceback (most recent call last):
  File "/home/rguigolab/bin/sashimi-plot.py", line 710, in <module>
    transcripts, exons = read_gtf(args.gtf, args.coordinates)
  File "/home/rguigolab/bin/sashimi-plot.py", line 316, in read_gtf
    if line.startswith("#"):
TypeError: startswith first arg must be bytes or a tuple of bytes, not str