PoC: metaGEM pipeline with sequenced genomes

guillecg / mars-biofoundry

Metabolic engineering towards a biofoundry on Mars

MIT License

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Closed guillecg closed 1 year ago

guillecg commented 1 year ago

[ ] Retrieve genomes for strains specified in Amils et al. 2023.
[ ] Check metaGEM tutorials and SymbNET tutorial and contents
[ ] Run metaGEM pipeline just for metabolic prediction (SMETANA, CarveME and MEMOTE)
[ ] Check mackinac

guillecg commented 1 year ago

Closed due to time constraints.