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guma44 / GEOparse

Python library to access Gene Expression Omnibus Database (GEO)
BSD 3-Clause "New" or "Revised" License
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Add Timeout to urlopen Calls #49

Closed Miserlou closed 6 years ago

Miserlou commented 6 years ago

This adds a timeout to urlopen calls.

This is significant for us, since we use GEOParse on such a large scale that these timeouts are a frequent problem.

The timeouts are only added in 'silent' mode, since the underlying wgetter does not use timeouts where it should.

Miserlou commented 6 years ago

Related: https://github.com/guma44/GEOparse/issues/46