Open grisaitis opened 3 years ago
i'm not sure if this is user error (probably) or library error, but for a particular GEO accession, I can't get GEOparse to download the main supplementary file.
check this out: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE127813
the accession has one supplementary file:
but, download_supplementary_files() doesn't download it:
download_supplementary_files()
import GEOparse gse_127813 = GEOparse.get_GEO(geo="GSE127813", destdir="./data_from_geoparse") gse_127813.download_supplementary_files()
$ tree -h ./data_from_geoparse data_from_geoparse/ └── [3.2K] GSE127813_family.soft.gz 0 directories, 1 file
am i doing something wrong?
i'm not sure if this is user error (probably) or library error, but for a particular GEO accession, I can't get GEOparse to download the main supplementary file.
check this out: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE127813
the accession has one supplementary file:
but,
download_supplementary_files()doesn't download it:am i doing something wrong?