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gustaveroussy / bigr_long-reads_bulk

Long-reads Bulk DNA-seq pipeline
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Add AnnotSV to the pipeline #5

Closed sandratra-rab closed 1 month ago

sandratra-rab commented 3 months ago

Works with hg38, hg37, mm9 and mm10 Not yet for T2T

sandratra-rab commented 3 months ago

Later: Add a step to generate a summary TSV file with reduced number of columns

sandratra-rab commented 1 month ago

variant convert error correction: https://github.com/lgmgeo/AnnotSV/issues/246#issuecomment-2269160553