gvbarroso / iSMC

The integrated Sequentially Markovian Coalescent
GNU General Public License v3.0
11 stars 3 forks source link

Off by one error in genomic coordinates #4

Closed gvbarroso closed 4 years ago

gvbarroso commented 4 years ago

Single-nucleotide maps advance one extra site per chromosome. For example, if the true genomic coordinates are

chr1 1-1000 chr2 1001-2000 chr3 2001-3000

then at the moment iSMC will run as if they were

chr1 1-1001 chr2 1002-2003 chr3 2004-3000