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gxiaolab / scAllele

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python >= 3.8 required #3

Open james-vincent opened 2 years ago

james-vincent commented 2 years ago

networkx python package states python >= 3.8 required. This should be stated in scAllele docs.

giovanniquinones commented 2 years ago

Thanks for catching this. I am uploading an updated version. Where you able to install scAllele after switching to Python 3.8 ?

james-vincent commented 2 years ago

I was not able to install the dependencies in requirements.txt by using pip. Instead I added all of those required packages to mamba and installed them together with python 3.8.13. After that I did the final install of scAllele with pip. This worked.

James Vincent, PhD Bioinformatics Software Curator Dept. of BCMP, Harvard Medical School — BioGrids.org --

On Jun 13, 2022, 2:41 PM -0400, Giovanni Quinones Valdez @.***>, wrote:

Thanks, for catching this. I am uploading an updated version. Where you able to install scAllele after switching to Python 3.8 ? — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: @.***>

giovanniquinones commented 2 years ago

Thank you for reporting the installation issues