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gyorilab / indra_db

A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own content and knowledge access. Our implementation of the database is the back-end to many of our projects, providing a vast and detailed knowledge base derived from many resources.
GNU General Public License v3.0
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Issue installing psycopg #218

Open cthoyt opened 1 year ago

cthoyt commented 1 year ago

Currently getting the following output when trying to install this package after pulling. I guess it can't build on an M2 mac. Changing psycopg2 to psycopg2-binary in the installer seemed to fix it.

(indra) cthoyt@nanovac ~/d/indra_db> pip install -e .
Obtaining file:///Users/cthoyt/dev/indra_db
  Preparing metadata (setup.py) ... done
Collecting sqlalchemy<1.4 (from indra-db==0.0.1)
  Using cached SQLAlchemy-1.3.24.tar.gz (6.4 MB)
  Preparing metadata (setup.py) ... done
Collecting psycopg2 (from indra-db==0.0.1)
  Using cached psycopg2-2.9.7.tar.gz (383 kB)
  Preparing metadata (setup.py) ... error
  error: subprocess-exited-with-error

  × python setup.py egg_info did not run successfully.
  │ exit code: 1
  ╰─> [23 lines of output]
      running egg_info
      creating /private/var/folders/vp/n7_7v49n7dl7ln9bs8r0wbt80000gn/T/pip-pip-egg-info-zvwmzg9_/psycopg2.egg-info
      writing /private/var/folders/vp/n7_7v49n7dl7ln9bs8r0wbt80000gn/T/pip-pip-egg-info-zvwmzg9_/psycopg2.egg-info/PKG-INFO
      writing dependency_links to /private/var/folders/vp/n7_7v49n7dl7ln9bs8r0wbt80000gn/T/pip-pip-egg-info-zvwmzg9_/psycopg2.egg-info/dependency_links.txt
      writing top-level names to /private/var/folders/vp/n7_7v49n7dl7ln9bs8r0wbt80000gn/T/pip-pip-egg-info-zvwmzg9_/psycopg2.egg-info/top_level.txt
      writing manifest file '/private/var/folders/vp/n7_7v49n7dl7ln9bs8r0wbt80000gn/T/pip-pip-egg-info-zvwmzg9_/psycopg2.egg-info/SOURCES.txt'

      Error: pg_config executable not found.

      pg_config is required to build psycopg2 from source.  Please add the directory
      containing pg_config to the $PATH or specify the full executable path with the
      option:

          python setup.py build_ext --pg-config /path/to/pg_config build ...

      or with the pg_config option in 'setup.cfg'.

      If you prefer to avoid building psycopg2 from source, please install the PyPI
      'psycopg2-binary' package instead.

      For further information please check the 'doc/src/install.rst' file (also at
      <https://www.psycopg.org/docs/install.html>).

      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed

× Encountered error while generating package metadata.
╰─> See above for output.

note: This is an issue with the package mentioned above, not pip.
hint: See above for details.