Closed mwdchang closed 2 months ago
When running the following code snippet with the attached model
f = open("shawn/sierdh.json") amr = json.load(f) mmt = model_from_json(amr) mmt2 = stratify(mmt, key="vax", strata=[ "u", "v" ], concepts_to_stratify = ["S", "E", "I"], # params_to_stratify = ["r_{IH}", "r_{IR}"], cartesian_control = True, structure = None, param_renaming_uses_strata_names = True );
It looks like the template names are duplicated in the resulting mmt2, should we expect template names to be unique within a single model?
for t in mmt2.templates: print(t.name)
When transforming back into a petrinet amr, the rates (semantics.ode.rates) are likewise duplicated:
testAmr = template_model_to_petrinet_json(mmt2) for r in testAmr["semantics"]["ode"]["rates"]: print(r["target"], " = ", r["expression"])
...snipped t0_u_v = I_v*S_u*β_u_v t0_v_u = I_u*S_v*β_v_u t0_u_v = S_u*p_u_v t0_v_u = S_v*p_v_u ...snipped
sierdh.json
When running the following code snippet with the attached model
It looks like the template names are duplicated in the resulting mmt2, should we expect template names to be unique within a single model?
When transforming back into a petrinet amr, the rates (semantics.ode.rates) are likewise duplicated:
sierdh.json