h3abionet / h3agatk

MIT License
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Process structure created up to Quality trimming continue #6

Closed AbrahamvdBerg closed 7 years ago

AbrahamvdBerg commented 7 years ago

I will start by creating the basic outline of the process in Nextflow. I do not see the script for Trimmomatic, so I will create the three trimming processes separately for now. Adaptor trimming, Quality trimming, and removal of very short reads. How can I combine these processes into one process?