hacone / AgIn

Process SMRT sequencing kinetic summary to predict regional methylation on large genome
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sbt do not recognize command #11

Open Anuragbio opened 6 years ago

Anuragbio commented 6 years ago

The execution of the program is explained in closed issues number 4.

drknnetz commented 6 years ago

I viewed close issue #4 and I get the following issue: ]$ ./sbt package-dist Getting org.scala-sbt sbt 0.12.0-RC3 ...

:: problems summary :: :::: WARNINGS module not found: org.scala-sbt#sbt;0.12.0-RC3

    ==== local: tried

      /home/dkennetz/.ivy2/local/org.scala-sbt/sbt/0.12.0-RC3/ivys/ivy.xml

    ==== typesafe-ivy-releases: tried

      http://repo.typesafe.com/typesafe/ivy-releases/org.scala-sbt/sbt/0.12.0-RC3/ivys/ivy.xml

    ==== Maven Central: tried

      http://repo1.maven.org/maven2/org/scala-sbt/sbt/0.12.0-RC3/sbt-0.12.0-RC3.pom

    ==== sonatype-snapshots: tried

      https://oss.sonatype.org/content/repositories/snapshots/org/scala-sbt/sbt/0.12.0-RC3/sbt-0.12.0-RC3.pom

            ::::::::::::::::::::::::::::::::::::::::::::::

            ::          UNRESOLVED DEPENDENCIES         ::

            ::::::::::::::::::::::::::::::::::::::::::::::

            :: org.scala-sbt#sbt;0.12.0-RC3: not found

            ::::::::::::::::::::::::::::::::::::::::::::::

:::: ERRORS Server access Error: Connection reset url=http://repo.typesafe.com/typesafe/ivy-releases/org.scala-sbt/sbt/0.12.0-RC3/ivys/ivy.xml

:: USE VERBOSE OR DEBUG MESSAGE LEVEL FOR MORE DETAILS unresolved dependency: org.scala-sbt#sbt;0.12.0-RC3: not found Error during sbt execution: Error retrieving required libraries (see /home/dkennetz/.sbt/boot/update.log for complete log) Error: Could not retrieve sbt 0.12.0-RC3

When I view any of the http addressed it posts in the top portion, none of them exist. Thanks for the help, Dennis

cascoamarillo commented 6 years ago

Hi, Sorry, but similar problem here. Following issue #4

$ ./sbt package-dist OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=384M; support was removed in 8.0 [info] Set current project to default-52c6fe (in build file:/home/user/AgIn/bin/) [error] Not a valid command: package-dist [error] Not a valid project ID: package-dist [error] Expected ':' [error] Not a valid key: package-dist (similar: package-bin, package-src, package-doc) [error] package-dist [error] ^

Then, looking for similar syntax:

`$ ./sbt OpenJDK 64-Bit Server VM warning: ignoring option MaxPermSize=384M; support was removed in 8.0 [info] Set current project to default-52c6fe (in build file:/home/user/AgIn/bin/)

Display all 243 possibilities? (y or n) package package-bin package-doc package-src packaged-artifacts`

Any idea what I'm doing wrong? Thanks