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haddocking / proABC-2

Deep learning framework to predict antibody paratope residues
Apache License 2.0
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Re-organize project #8

Closed rvhonorato closed 5 months ago

rvhonorato commented 5 months ago

This PR re-organizes the project into a more python-like structure in line with the other tools of the group.

It also changes the installation instructions to use pure python instead of anaconda, the third-party dependencies are clearly stated now and also instructions on how to install them are provided.

Huge atomic PR, i know 🙂

codacy-production[bot] commented 5 months ago

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Coverage variation Diff coverage
Report missing for a916ea1368b713268ead131b40d8b48a46557132[^1] :white_check_mark: 52.81%
Coverage variation details | | Coverable lines | Covered lines | Coverage | | ------------- | ------------- | ------------- | ------------- | | Common ancestor commit (a916ea1368b713268ead131b40d8b48a46557132) | Report Missing | Report Missing | Report Missing | | | Head commit (e5a4f0ecb431ef849d61d3806f01737d9476a4c7) | 778 | 476 | 61.18% | **Coverage variation** is the difference between the coverage for the head and common ancestor commits of the pull request branch: ` - `
Diff coverage details | | Coverable lines | Covered lines | Diff coverage | | ------------- | ------------- | ------------- | ------------- | | Pull request (#8) | 445 | 235 | **52.81%** | **Diff coverage** is the percentage of lines that are covered by tests out of the coverable lines that the pull request added or modified: `/ * 100%`

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