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hadexversum / HaDeX

Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data

http://mslab-ibb.pl/shiny/HaDeX/

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Improve tests #71

Open KrystynaGrzesiak opened 3 years ago

KrystynaGrzesiak commented 3 years ago

Some functions need to be tested.

[ ] add_stat_dependency
[ ] calculate_confidence_limit_values
[ ] calculate_exp_masses_per_replicate
[ ] create_overlap_distribution_dataset
[ ] HaDeX_gui
[ ] HaDeXify
[ ] plot_amino_distribution
[x] plot_butterfly
[x] plot_chiclet
[x] plot_coverage
[x] plot_differential
[x] plot_differential_butterfly
[x] plot_differential_chiclet
[x] plot_kinetics
[x] plot_overlap
[x] plot_overlap_distribution
[x] plot_position_frequency
[x] plot_quality_control
[x] plot_state_comparison
[x] plot_volcano
[ ] read_hdx
[ ] update_hdexaminer_file

werpuc commented 3 years ago

HaDeX_gui() function won't be tested.

KrystynaGrzesiak commented 3 years ago

test for data.table in show_summary_data fails, as this function is not written in data.table yet