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haesleinhuepf / BioImageAnalysisNotebooks

Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more
https://haesleinhuepf.github.io/BioImageAnalysisNotebooks
BSD 3-Clause "New" or "Revised" License
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napari and nD visualization #19

Closed guiwitz closed 1 year ago

guiwitz commented 2 years ago

The chapter "Image visualization in 3D" actually presents nD visualization cases rather than just 3D. Should it be renamed? Also the notebook on napari only uses the blobs image and the explanations are quite limited. Should this notebook be extended and improved? Also this notebook is a bit redundant with the one presented in the GUI chapter. Should just one be kept? And should there be one notebook that explains all basic ideas of napari or would this be redundant with other tutorials/resources? I sort of like the idea to have all minimum material in one place but that's of course up for debate.

haesleinhuepf commented 2 years ago

It's tricky indeed. Maybe we can move the basics for visualization (including napari) into a visualization chapter and additionally have the more advanced stuff in the GUI folder? I'm also not exactly sure about where to draw the red line though...