haesleinhuepf / BioImageAnalysisNotebooks

Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more
https://haesleinhuepf.github.io/BioImageAnalysisNotebooks
BSD 3-Clause "New" or "Revised" License
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Truncated content in "Computing with images" notebook #29

Closed iimog closed 1 year ago

iimog commented 1 year ago

Towards the end of the "Computing with images" notebook is a code cell, that seems to contain additional (truncated) content:

Finally we might want to have a look at the actual distribution of pixel values. For this

image

I'm not sure, whether the rest of the content is missing or whether it was an active decision to remove that content (and this cell is just a left over). In case of the latter, I'm happy to send a pull request just removing this cell.

https://github.com/haesleinhuepf/BioImageAnalysisNotebooks/blob/b4729c433295a4f758c09e2d3fb0eda817ed001c/docs/12_image_analysis_basics/03_Computing_with_images.ipynb?short_path=0fae393#L371-L380

PS: Thanks for this amazing learning and teaching material :blue_heart:

haesleinhuepf commented 1 year ago

Hi @iimog ,

thanks for the bug report! I'll fix that asap. I presume we wanted to show a histogram at that point. You find an older version of this notebook with the histogram here: https://github.com/BiAPoL/Bio-image_Analysis_with_Python/blob/a62070dee408814cee4258758f5187f135774519/image_processing/02_Working_with_images.ipynb

Thanks again!

Best, Robert