This message was generated by git-bob (version: 0.3.2, model: gpt-4o-2024-08-06), an experimental AI-based assistant. It can make mistakes and has limitations. Check its messages carefully.
Created a new Jupyter notebook, cell_segmentation.ipynb, under the notebooks folder to implement cell segmentation using the watershed algorithm. Steps include loading the microscopy image data/membrane2d.png, enhancing contrast, applying thresholding, computing the distance transform, applying watershed to segment the cells, and measuring their regions to calculate average cell area.
This message was generated by git-bob (version: 0.3.2, model: gpt-4o-2024-08-06), an experimental AI-based assistant. It can make mistakes and has limitations. Check its messages carefully.
Created a new Jupyter notebook,
cell_segmentation.ipynb, under thenotebooksfolder to implement cell segmentation using the watershed algorithm. Steps include loading the microscopy imagedata/membrane2d.png, enhancing contrast, applying thresholding, computing the distance transform, applying watershed to segment the cells, and measuring their regions to calculate average cell area.closes #21