We should list criteria describing what things will be accepted as PR, and what not. Starting point for discussion:
We accept:
PRs introducing new simple or complex tasks commonly done by bio-image analysts
Tasks can be from any common workflow step in image processing, segmentation, feature extraction, tabular data wranging, statistics, dimensionality reduction, clustering
Tasks involving multiple example image files or folder (see example_data folder)
Tricky multi-step workflows are explicitly welcome, also if workflow designers suspect that no LLM can solve them at this point.
Imaging modalities such as brightfield microscopy, fluorescence microscopy, electron microscopy, histology/histopathology are welcome
Functional correctness should be evaluated on simple (small) example data.
We do not accept:
new imaging modalities that are not commonly referred to as bio-image analysis (example: medical imaging, CT, MRI, astronomy, material science EM)
new requirements that do not run on common computers or require specific hardware (e.g. CUDA)
new files in the example_data folder that are larger than a small number of megabytes. Tests should use minimal amount of data
new test-cases that need long run-time (approx > 0.3 seconds)
We should list criteria describing what things will be accepted as PR, and what not. Starting point for discussion:
We accept:
We do not accept: