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hahnlab / CAFE5

Version 5 of the CAFE phylogenetics software
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compilation terminated. #108

Closed mergi-2674 closed 1 year ago

mergi-2674 commented 1 year ago

Hi I was compiling CAFE5 in my linux machine and while i was on make step i received this error. /home/wbiw/miniconda3/bin/x86_64-conda-linux-gnu-c++ -std=c++11 -I. -O3 -include config.h -fopenmp -c src/likelihood_ratio.cpp -o obj/likelihood_ratio.o /home/wbiw/miniconda3/bin/x86_64-conda-linux-gnu-c++ -std=c++11 -I. -O3 -include config.h -fopenmp -c src/matrix_cache.cpp -o obj/matrix_cache.o src/matrix_cache.cpp:15:10: fatal error: mkl.h: No such file or directory

include "mkl.h"

      ^~~~~~~

compilation terminated. make: *** [Makefile:35: obj/matrix_cache.o] Error 1

How can i fix it?

Thanks

benfulton commented 1 year ago

Can you install the Intel MKL math library? The installer is here: https://software.intel.com/content/www/us/en/develop/tools/oneapi/components/onemkl.html

github-actions[bot] commented 1 year ago

This issue is stale because it has been open for 90 days with no activity.

github-actions[bot] commented 1 year ago

This issue was closed because it has been inactive for 14 days since being marked as stale.