hail-is / hail

Cloud-native genomic dataframes and batch computing
https://hail.is
MIT License
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[vds] Unify GT/LGT after split_multi for reference data #14695

Closed chrisvittal closed 2 months ago

chrisvittal commented 2 months ago

After split_multi, LGT is dropped from the variant data of a VDS. After PR #14560, LGT is added to datasets after creation via the combiner. After #14675 the same is true for from_merged_representation. We should keep the GT/LGT field consistent across ref and var data. This change does so for split_multi.

Resolves #14694