The Amissense Tool analyzes and visualizes AlphaMissense pathogenicity scores, integrating AlphaFold structures and ClinVar data. It offers automated pipelines, visualizations, and versatile command-line utilities.
Description:
Add functionality to generate an HTML report summarizing the results of the pipeline. This report can include visualizations, metrics, and other relevant information, making it easier to review the results in a structured format.
Proposed Solution:
Create a reporting module that generates an HTML report.
Include all visualizations and key metrics in the report.
Allow customization of the report template via config.json.
Add an option in the CLI to generate the report at the end of the pipeline run.
Description:
Add functionality to generate an HTML report summarizing the results of the pipeline. This report can include visualizations, metrics, and other relevant information, making it easier to review the results in a structured format.
Proposed Solution:
config.json.