The Amissense Tool analyzes and visualizes AlphaMissense pathogenicity scores, integrating AlphaFold structures and ClinVar data. It offers automated pipelines, visualizations, and versatile command-line utilities.
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Feat: Add Progress Bars for Long-Running Processes #28
Description:
Implement progress bars (e.g., using tqdm) for long-running tasks such as fetching large datasets, downloading multiple files, or processing large TSV/JSON files. This will improve user experience by providing feedback on the task's progress.
Proposed Solution:
Use tqdm or a similar library to implement progress bars.
Display progress bars for tasks that take longer than a configurable threshold (e.g., 5 seconds).
Ensure that progress bars work with both CLI and non-interactive environments (e.g., logging).
Description:
Implement progress bars (e.g., using
tqdm
) for long-running tasks such as fetching large datasets, downloading multiple files, or processing large TSV/JSON files. This will improve user experience by providing feedback on the task's progress.Proposed Solution:
tqdm
or a similar library to implement progress bars.